Rick van Hattem
866 lines
202 KiB
Plaintext
866 lines
202 KiB
Plaintext
{
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"cells": [
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{
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"cell_type": "code",
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"execution_count": 2,
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"id": "a53c6e0d",
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"metadata": {},
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"outputs": [
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{
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"data": {
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"text/html": [
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"\n",
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" <div class=\"bk-root\">\n",
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" <a href=\"https://bokeh.org\" target=\"_blank\" class=\"bk-logo bk-logo-small bk-logo-notebook\"></a>\n",
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" <span id=\"1149\">Loading BokehJS ...</span>\n",
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" </div>"
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]
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},
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"metadata": {},
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"output_type": "display_data"
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},
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{
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"data": {
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"application/javascript": [
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"\n",
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"(function(root) {\n",
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" function now() {\n",
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" return new Date();\n",
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" }\n",
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"\n",
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" var force = true;\n",
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"\n",
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" if (typeof root._bokeh_onload_callbacks === \"undefined\" || force === true) {\n",
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" root._bokeh_onload_callbacks = [];\n",
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" root._bokeh_is_loading = undefined;\n",
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" }\n",
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"\n",
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" var JS_MIME_TYPE = 'application/javascript';\n",
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" var HTML_MIME_TYPE = 'text/html';\n",
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" var EXEC_MIME_TYPE = 'application/vnd.bokehjs_exec.v0+json';\n",
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" var CLASS_NAME = 'output_bokeh rendered_html';\n",
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"\n",
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" /**\n",
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" * Render data to the DOM node\n",
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" */\n",
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" function render(props, node) {\n",
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" var script = document.createElement(\"script\");\n",
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" node.appendChild(script);\n",
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" }\n",
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"\n",
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" /**\n",
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" * Handle when an output is cleared or removed\n",
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" */\n",
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" function handleClearOutput(event, handle) {\n",
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" var cell = handle.cell;\n",
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"\n",
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" var id = cell.output_area._bokeh_element_id;\n",
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" var server_id = cell.output_area._bokeh_server_id;\n",
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" // Clean up Bokeh references\n",
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" if (id != null && id in Bokeh.index) {\n",
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" Bokeh.index[id].model.document.clear();\n",
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" delete Bokeh.index[id];\n",
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" }\n",
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"\n",
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" if (server_id !== undefined) {\n",
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" // Clean up Bokeh references\n",
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" var cmd = \"from bokeh.io.state import curstate; print(curstate().uuid_to_server['\" + server_id + \"'].get_sessions()[0].document.roots[0]._id)\";\n",
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" cell.notebook.kernel.execute(cmd, {\n",
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" iopub: {\n",
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" output: function(msg) {\n",
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" var id = msg.content.text.trim();\n",
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" if (id in Bokeh.index) {\n",
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" Bokeh.index[id].model.document.clear();\n",
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" delete Bokeh.index[id];\n",
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" }\n",
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" }\n",
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" }\n",
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" });\n",
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" // Destroy server and session\n",
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" var cmd = \"import bokeh.io.notebook as ion; ion.destroy_server('\" + server_id + \"')\";\n",
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" cell.notebook.kernel.execute(cmd);\n",
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" }\n",
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" }\n",
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"\n",
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" /**\n",
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" * Handle when a new output is added\n",
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" */\n",
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" function handleAddOutput(event, handle) {\n",
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" var output_area = handle.output_area;\n",
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" var output = handle.output;\n",
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"\n",
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" // limit handleAddOutput to display_data with EXEC_MIME_TYPE content only\n",
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" if ((output.output_type != \"display_data\") || (!Object.prototype.hasOwnProperty.call(output.data, EXEC_MIME_TYPE))) {\n",
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" return\n",
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" }\n",
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"\n",
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" var toinsert = output_area.element.find(\".\" + CLASS_NAME.split(' ')[0]);\n",
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"\n",
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" if (output.metadata[EXEC_MIME_TYPE][\"id\"] !== undefined) {\n",
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" toinsert[toinsert.length - 1].firstChild.textContent = output.data[JS_MIME_TYPE];\n",
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" // store reference to embed id on output_area\n",
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" output_area._bokeh_element_id = output.metadata[EXEC_MIME_TYPE][\"id\"];\n",
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" }\n",
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" if (output.metadata[EXEC_MIME_TYPE][\"server_id\"] !== undefined) {\n",
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" var bk_div = document.createElement(\"div\");\n",
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" bk_div.innerHTML = output.data[HTML_MIME_TYPE];\n",
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" var script_attrs = bk_div.children[0].attributes;\n",
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" for (var i = 0; i < script_attrs.length; i++) {\n",
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" toinsert[toinsert.length - 1].firstChild.setAttribute(script_attrs[i].name, script_attrs[i].value);\n",
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" toinsert[toinsert.length - 1].firstChild.textContent = bk_div.children[0].textContent\n",
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" }\n",
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" // store reference to server id on output_area\n",
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" output_area._bokeh_server_id = output.metadata[EXEC_MIME_TYPE][\"server_id\"];\n",
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" }\n",
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" }\n",
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"\n",
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" function register_renderer(events, OutputArea) {\n",
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"\n",
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" function append_mime(data, metadata, element) {\n",
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" // create a DOM node to render to\n",
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" var toinsert = this.create_output_subarea(\n",
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" metadata,\n",
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" CLASS_NAME,\n",
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" EXEC_MIME_TYPE\n",
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" );\n",
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" this.keyboard_manager.register_events(toinsert);\n",
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" // Render to node\n",
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" var props = {data: data, metadata: metadata[EXEC_MIME_TYPE]};\n",
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" render(props, toinsert[toinsert.length - 1]);\n",
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" element.append(toinsert);\n",
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" return toinsert\n",
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" }\n",
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"\n",
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" /* Handle when an output is cleared or removed */\n",
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" events.on('clear_output.CodeCell', handleClearOutput);\n",
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" events.on('delete.Cell', handleClearOutput);\n",
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"\n",
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" /* Handle when a new output is added */\n",
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" events.on('output_added.OutputArea', handleAddOutput);\n",
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"\n",
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" /**\n",
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" * Register the mime type and append_mime function with output_area\n",
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" */\n",
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" OutputArea.prototype.register_mime_type(EXEC_MIME_TYPE, append_mime, {\n",
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" /* Is output safe? */\n",
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" safe: true,\n",
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" /* Index of renderer in `output_area.display_order` */\n",
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" index: 0\n",
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" });\n",
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" }\n",
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"\n",
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" // register the mime type if in Jupyter Notebook environment and previously unregistered\n",
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" if (root.Jupyter !== undefined) {\n",
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" var events = require('base/js/events');\n",
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" var OutputArea = require('notebook/js/outputarea').OutputArea;\n",
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"\n",
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" if (OutputArea.prototype.mime_types().indexOf(EXEC_MIME_TYPE) == -1) {\n",
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" register_renderer(events, OutputArea);\n",
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" }\n",
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" }\n",
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"\n",
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" \n",
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" if (typeof (root._bokeh_timeout) === \"undefined\" || force === true) {\n",
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" root._bokeh_timeout = Date.now() + 5000;\n",
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" root._bokeh_failed_load = false;\n",
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" }\n",
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"\n",
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" var NB_LOAD_WARNING = {'data': {'text/html':\n",
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" \"<div style='background-color: #fdd'>\\n\"+\n",
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" \"<p>\\n\"+\n",
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" \"BokehJS does not appear to have successfully loaded. If loading BokehJS from CDN, this \\n\"+\n",
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" \"may be due to a slow or bad network connection. Possible fixes:\\n\"+\n",
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" \"</p>\\n\"+\n",
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" \"<ul>\\n\"+\n",
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" \"<li>re-rerun `output_notebook()` to attempt to load from CDN again, or</li>\\n\"+\n",
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" \"<li>use INLINE resources instead, as so:</li>\\n\"+\n",
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" \"</ul>\\n\"+\n",
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" \"<code>\\n\"+\n",
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" \"from bokeh.resources import INLINE\\n\"+\n",
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" \"output_notebook(resources=INLINE)\\n\"+\n",
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" \"</code>\\n\"+\n",
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" \"</div>\"}};\n",
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"\n",
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" function display_loaded() {\n",
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" var el = document.getElementById(\"1149\");\n",
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" if (el != null) {\n",
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" el.textContent = \"BokehJS is loading...\";\n",
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" }\n",
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" if (root.Bokeh !== undefined) {\n",
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" if (el != null) {\n",
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" el.textContent = \"BokehJS \" + root.Bokeh.version + \" successfully loaded.\";\n",
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" }\n",
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" } else if (Date.now() < root._bokeh_timeout) {\n",
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" setTimeout(display_loaded, 100)\n",
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" }\n",
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" }\n",
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"\n",
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"\n",
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" function run_callbacks() {\n",
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" try {\n",
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" root._bokeh_onload_callbacks.forEach(function(callback) {\n",
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" if (callback != null)\n",
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" callback();\n",
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" });\n",
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" } finally {\n",
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" delete root._bokeh_onload_callbacks\n",
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" }\n",
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" console.debug(\"Bokeh: all callbacks have finished\");\n",
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" }\n",
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"\n",
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" function load_libs(css_urls, js_urls, callback) {\n",
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" if (css_urls == null) css_urls = [];\n",
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" if (js_urls == null) js_urls = [];\n",
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"\n",
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" root._bokeh_onload_callbacks.push(callback);\n",
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" if (root._bokeh_is_loading > 0) {\n",
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" console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n",
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" return null;\n",
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" }\n",
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" if (js_urls == null || js_urls.length === 0) {\n",
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" run_callbacks();\n",
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" return null;\n",
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" }\n",
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" console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n",
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" root._bokeh_is_loading = css_urls.length + js_urls.length;\n",
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"\n",
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" function on_load() {\n",
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" root._bokeh_is_loading--;\n",
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" if (root._bokeh_is_loading === 0) {\n",
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" console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n",
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" run_callbacks()\n",
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" }\n",
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" }\n",
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"\n",
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" function on_error(url) {\n",
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" console.error(\"failed to load \" + url);\n",
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" }\n",
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"\n",
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" for (let i = 0; i < css_urls.length; i++) {\n",
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" const url = css_urls[i];\n",
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" const element = document.createElement(\"link\");\n",
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" element.onload = on_load;\n",
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" element.onerror = on_error.bind(null, url);\n",
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" element.rel = \"stylesheet\";\n",
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" element.type = \"text/css\";\n",
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" element.href = url;\n",
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" console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n",
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" document.body.appendChild(element);\n",
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" }\n",
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"\n",
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" const hashes = {\"https://cdn.bokeh.org/bokeh/release/bokeh-2.3.3.min.js\": \"dM3QQsP+wXdHg42wTqW85BjZQdLNNIXqlPw/BgKoExPmTG7ZLML4EGqLMfqHT6ON\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-2.3.3.min.js\": \"8x57I4YuIfu8XyZfFo0XVr2WAT8EK4rh/uDe3wF7YuW2FNUSNEpJbsPaB1nJ2fz2\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-2.3.3.min.js\": \"3QTqdz9LyAm2i0sG5XTePsHec3UHWwVsrOL68SYRoAXsafvfAyqtQ+h440+qIBhS\"};\n",
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"\n",
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" for (let i = 0; i < js_urls.length; i++) {\n",
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" const url = js_urls[i];\n",
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" const element = document.createElement('script');\n",
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" element.onload = on_load;\n",
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" element.onerror = on_error.bind(null, url);\n",
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" element.async = false;\n",
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" element.src = url;\n",
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" if (url in hashes) {\n",
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" element.crossOrigin = \"anonymous\";\n",
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" element.integrity = \"sha384-\" + hashes[url];\n",
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" }\n",
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" console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n",
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" document.head.appendChild(element);\n",
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" }\n",
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" };\n",
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"\n",
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" function inject_raw_css(css) {\n",
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" const element = document.createElement(\"style\");\n",
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" element.appendChild(document.createTextNode(css));\n",
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" document.body.appendChild(element);\n",
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" }\n",
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"\n",
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" \n",
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" var js_urls = [\"https://cdn.bokeh.org/bokeh/release/bokeh-2.3.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-2.3.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-2.3.3.min.js\"];\n",
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" var css_urls = [];\n",
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" \n",
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"\n",
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" var inline_js = [\n",
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" function(Bokeh) {\n",
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" Bokeh.set_log_level(\"info\");\n",
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" },\n",
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" function(Bokeh) {\n",
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" \n",
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" \n",
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" }\n",
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" ];\n",
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"\n",
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" function run_inline_js() {\n",
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" \n",
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" if (root.Bokeh !== undefined || force === true) {\n",
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" \n",
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" for (var i = 0; i < inline_js.length; i++) {\n",
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" inline_js[i].call(root, root.Bokeh);\n",
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" }\n",
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" if (force === true) {\n",
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" display_loaded();\n",
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" }} else if (Date.now() < root._bokeh_timeout) {\n",
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" setTimeout(run_inline_js, 100);\n",
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" } else if (!root._bokeh_failed_load) {\n",
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" console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n",
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" root._bokeh_failed_load = true;\n",
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" } else if (force !== true) {\n",
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" var cell = $(document.getElementById(\"1149\")).parents('.cell').data().cell;\n",
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" cell.output_area.append_execute_result(NB_LOAD_WARNING)\n",
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" }\n",
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"\n",
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" }\n",
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"\n",
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" if (root._bokeh_is_loading === 0) {\n",
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" console.debug(\"Bokeh: BokehJS loaded, going straight to plotting\");\n",
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" run_inline_js();\n",
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" } else {\n",
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" load_libs(css_urls, js_urls, function() {\n",
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" console.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n",
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" run_inline_js();\n",
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" });\n",
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" }\n",
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"}(window));"
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],
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"application/vnd.bokehjs_load.v0+json": "\n(function(root) {\n function now() {\n return new Date();\n }\n\n var force = true;\n\n if (typeof root._bokeh_onload_callbacks === \"undefined\" || force === true) {\n root._bokeh_onload_callbacks = [];\n root._bokeh_is_loading = undefined;\n }\n\n \n\n \n if (typeof (root._bokeh_timeout) === \"undefined\" || force === true) {\n root._bokeh_timeout = Date.now() + 5000;\n root._bokeh_failed_load = false;\n }\n\n var NB_LOAD_WARNING = {'data': {'text/html':\n \"<div style='background-color: #fdd'>\\n\"+\n \"<p>\\n\"+\n \"BokehJS does not appear to have successfully loaded. If loading BokehJS from CDN, this \\n\"+\n \"may be due to a slow or bad network connection. 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" var render_items = [{\"docid\":\"9121c1bf-bb91-453d-8cb3-e3116a46ddee\",\"root_ids\":[\"1150\"],\"roots\":{\"1150\":\"d0d35173-444e-4c33-80ce-6f6af7428507\"}}];\n",
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" root.Bokeh.embed.embed_items_notebook(docs_json, render_items);\n",
|
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"\n",
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" }\n",
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" if (root.Bokeh !== undefined) {\n",
|
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" embed_document(root);\n",
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" } else {\n",
|
|
" var attempts = 0;\n",
|
|
" var timer = setInterval(function(root) {\n",
|
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" if (root.Bokeh !== undefined) {\n",
|
|
" clearInterval(timer);\n",
|
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" embed_document(root);\n",
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" } else {\n",
|
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" attempts++;\n",
|
|
" if (attempts > 100) {\n",
|
|
" clearInterval(timer);\n",
|
|
" console.log(\"Bokeh: ERROR: Unable to run BokehJS code because BokehJS library is missing\");\n",
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" }\n",
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" }\n",
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" }, 10, root)\n",
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" }\n",
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"})(window);"
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],
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|
|
"application/vnd.bokehjs_exec.v0+json": {
|
|
"id": "1150"
|
|
}
|
|
},
|
|
"output_type": "display_data"
|
|
}
|
|
],
|
|
"source": [
|
|
"import numpy as np\n",
|
|
"\n",
|
|
"from bokeh.plotting import figure, show\n",
|
|
"from bokeh.io import output_notebook\n",
|
|
"\n",
|
|
"# Load all javascript/css for bokeh\n",
|
|
"output_notebook()\n",
|
|
"\n",
|
|
"# Create a numpy array of length 100 from 0 to 4 pi\n",
|
|
"x = np.linspace(0, 4*np.pi, 100)\n",
|
|
"\n",
|
|
"# Create a bokeh figure to draw on\n",
|
|
"p = figure()\n",
|
|
"# Draw both a sine and a cosine\n",
|
|
"p.line(x, np.sin(x), legend_label='sin(x)', line_dash='dotted')\n",
|
|
"p.line(x, np.cos(x), legend_label='cos(x)')\n",
|
|
"\n",
|
|
"# Render the output\n",
|
|
"show(p)"
|
|
]
|
|
},
|
|
{
|
|
"cell_type": "code",
|
|
"execution_count": 3,
|
|
"id": "fd786f06",
|
|
"metadata": {},
|
|
"outputs": [
|
|
{
|
|
"data": {
|
|
"text/html": [
|
|
"\n",
|
|
" <div class=\"bk-root\">\n",
|
|
" <a href=\"https://bokeh.org\" target=\"_blank\" class=\"bk-logo bk-logo-small bk-logo-notebook\"></a>\n",
|
|
" <span id=\"1309\">Loading BokehJS ...</span>\n",
|
|
" </div>"
|
|
]
|
|
},
|
|
"metadata": {},
|
|
"output_type": "display_data"
|
|
},
|
|
{
|
|
"data": {
|
|
"application/javascript": [
|
|
"\n",
|
|
"(function(root) {\n",
|
|
" function now() {\n",
|
|
" return new Date();\n",
|
|
" }\n",
|
|
"\n",
|
|
" var force = true;\n",
|
|
"\n",
|
|
" if (typeof root._bokeh_onload_callbacks === \"undefined\" || force === true) {\n",
|
|
" root._bokeh_onload_callbacks = [];\n",
|
|
" root._bokeh_is_loading = undefined;\n",
|
|
" }\n",
|
|
"\n",
|
|
" var JS_MIME_TYPE = 'application/javascript';\n",
|
|
" var HTML_MIME_TYPE = 'text/html';\n",
|
|
" var EXEC_MIME_TYPE = 'application/vnd.bokehjs_exec.v0+json';\n",
|
|
" var CLASS_NAME = 'output_bokeh rendered_html';\n",
|
|
"\n",
|
|
" /**\n",
|
|
" * Render data to the DOM node\n",
|
|
" */\n",
|
|
" function render(props, node) {\n",
|
|
" var script = document.createElement(\"script\");\n",
|
|
" node.appendChild(script);\n",
|
|
" }\n",
|
|
"\n",
|
|
" /**\n",
|
|
" * Handle when an output is cleared or removed\n",
|
|
" */\n",
|
|
" function handleClearOutput(event, handle) {\n",
|
|
" var cell = handle.cell;\n",
|
|
"\n",
|
|
" var id = cell.output_area._bokeh_element_id;\n",
|
|
" var server_id = cell.output_area._bokeh_server_id;\n",
|
|
" // Clean up Bokeh references\n",
|
|
" if (id != null && id in Bokeh.index) {\n",
|
|
" Bokeh.index[id].model.document.clear();\n",
|
|
" delete Bokeh.index[id];\n",
|
|
" }\n",
|
|
"\n",
|
|
" if (server_id !== undefined) {\n",
|
|
" // Clean up Bokeh references\n",
|
|
" var cmd = \"from bokeh.io.state import curstate; print(curstate().uuid_to_server['\" + server_id + \"'].get_sessions()[0].document.roots[0]._id)\";\n",
|
|
" cell.notebook.kernel.execute(cmd, {\n",
|
|
" iopub: {\n",
|
|
" output: function(msg) {\n",
|
|
" var id = msg.content.text.trim();\n",
|
|
" if (id in Bokeh.index) {\n",
|
|
" Bokeh.index[id].model.document.clear();\n",
|
|
" delete Bokeh.index[id];\n",
|
|
" }\n",
|
|
" }\n",
|
|
" }\n",
|
|
" });\n",
|
|
" // Destroy server and session\n",
|
|
" var cmd = \"import bokeh.io.notebook as ion; ion.destroy_server('\" + server_id + \"')\";\n",
|
|
" cell.notebook.kernel.execute(cmd);\n",
|
|
" }\n",
|
|
" }\n",
|
|
"\n",
|
|
" /**\n",
|
|
" * Handle when a new output is added\n",
|
|
" */\n",
|
|
" function handleAddOutput(event, handle) {\n",
|
|
" var output_area = handle.output_area;\n",
|
|
" var output = handle.output;\n",
|
|
"\n",
|
|
" // limit handleAddOutput to display_data with EXEC_MIME_TYPE content only\n",
|
|
" if ((output.output_type != \"display_data\") || (!Object.prototype.hasOwnProperty.call(output.data, EXEC_MIME_TYPE))) {\n",
|
|
" return\n",
|
|
" }\n",
|
|
"\n",
|
|
" var toinsert = output_area.element.find(\".\" + CLASS_NAME.split(' ')[0]);\n",
|
|
"\n",
|
|
" if (output.metadata[EXEC_MIME_TYPE][\"id\"] !== undefined) {\n",
|
|
" toinsert[toinsert.length - 1].firstChild.textContent = output.data[JS_MIME_TYPE];\n",
|
|
" // store reference to embed id on output_area\n",
|
|
" output_area._bokeh_element_id = output.metadata[EXEC_MIME_TYPE][\"id\"];\n",
|
|
" }\n",
|
|
" if (output.metadata[EXEC_MIME_TYPE][\"server_id\"] !== undefined) {\n",
|
|
" var bk_div = document.createElement(\"div\");\n",
|
|
" bk_div.innerHTML = output.data[HTML_MIME_TYPE];\n",
|
|
" var script_attrs = bk_div.children[0].attributes;\n",
|
|
" for (var i = 0; i < script_attrs.length; i++) {\n",
|
|
" toinsert[toinsert.length - 1].firstChild.setAttribute(script_attrs[i].name, script_attrs[i].value);\n",
|
|
" toinsert[toinsert.length - 1].firstChild.textContent = bk_div.children[0].textContent\n",
|
|
" }\n",
|
|
" // store reference to server id on output_area\n",
|
|
" output_area._bokeh_server_id = output.metadata[EXEC_MIME_TYPE][\"server_id\"];\n",
|
|
" }\n",
|
|
" }\n",
|
|
"\n",
|
|
" function register_renderer(events, OutputArea) {\n",
|
|
"\n",
|
|
" function append_mime(data, metadata, element) {\n",
|
|
" // create a DOM node to render to\n",
|
|
" var toinsert = this.create_output_subarea(\n",
|
|
" metadata,\n",
|
|
" CLASS_NAME,\n",
|
|
" EXEC_MIME_TYPE\n",
|
|
" );\n",
|
|
" this.keyboard_manager.register_events(toinsert);\n",
|
|
" // Render to node\n",
|
|
" var props = {data: data, metadata: metadata[EXEC_MIME_TYPE]};\n",
|
|
" render(props, toinsert[toinsert.length - 1]);\n",
|
|
" element.append(toinsert);\n",
|
|
" return toinsert\n",
|
|
" }\n",
|
|
"\n",
|
|
" /* Handle when an output is cleared or removed */\n",
|
|
" events.on('clear_output.CodeCell', handleClearOutput);\n",
|
|
" events.on('delete.Cell', handleClearOutput);\n",
|
|
"\n",
|
|
" /* Handle when a new output is added */\n",
|
|
" events.on('output_added.OutputArea', handleAddOutput);\n",
|
|
"\n",
|
|
" /**\n",
|
|
" * Register the mime type and append_mime function with output_area\n",
|
|
" */\n",
|
|
" OutputArea.prototype.register_mime_type(EXEC_MIME_TYPE, append_mime, {\n",
|
|
" /* Is output safe? */\n",
|
|
" safe: true,\n",
|
|
" /* Index of renderer in `output_area.display_order` */\n",
|
|
" index: 0\n",
|
|
" });\n",
|
|
" }\n",
|
|
"\n",
|
|
" // register the mime type if in Jupyter Notebook environment and previously unregistered\n",
|
|
" if (root.Jupyter !== undefined) {\n",
|
|
" var events = require('base/js/events');\n",
|
|
" var OutputArea = require('notebook/js/outputarea').OutputArea;\n",
|
|
"\n",
|
|
" if (OutputArea.prototype.mime_types().indexOf(EXEC_MIME_TYPE) == -1) {\n",
|
|
" register_renderer(events, OutputArea);\n",
|
|
" }\n",
|
|
" }\n",
|
|
"\n",
|
|
" \n",
|
|
" if (typeof (root._bokeh_timeout) === \"undefined\" || force === true) {\n",
|
|
" root._bokeh_timeout = Date.now() + 5000;\n",
|
|
" root._bokeh_failed_load = false;\n",
|
|
" }\n",
|
|
"\n",
|
|
" var NB_LOAD_WARNING = {'data': {'text/html':\n",
|
|
" \"<div style='background-color: #fdd'>\\n\"+\n",
|
|
" \"<p>\\n\"+\n",
|
|
" \"BokehJS does not appear to have successfully loaded. If loading BokehJS from CDN, this \\n\"+\n",
|
|
" \"may be due to a slow or bad network connection. Possible fixes:\\n\"+\n",
|
|
" \"</p>\\n\"+\n",
|
|
" \"<ul>\\n\"+\n",
|
|
" \"<li>re-rerun `output_notebook()` to attempt to load from CDN again, or</li>\\n\"+\n",
|
|
" \"<li>use INLINE resources instead, as so:</li>\\n\"+\n",
|
|
" \"</ul>\\n\"+\n",
|
|
" \"<code>\\n\"+\n",
|
|
" \"from bokeh.resources import INLINE\\n\"+\n",
|
|
" \"output_notebook(resources=INLINE)\\n\"+\n",
|
|
" \"</code>\\n\"+\n",
|
|
" \"</div>\"}};\n",
|
|
"\n",
|
|
" function display_loaded() {\n",
|
|
" var el = document.getElementById(\"1309\");\n",
|
|
" if (el != null) {\n",
|
|
" el.textContent = \"BokehJS is loading...\";\n",
|
|
" }\n",
|
|
" if (root.Bokeh !== undefined) {\n",
|
|
" if (el != null) {\n",
|
|
" el.textContent = \"BokehJS \" + root.Bokeh.version + \" successfully loaded.\";\n",
|
|
" }\n",
|
|
" } else if (Date.now() < root._bokeh_timeout) {\n",
|
|
" setTimeout(display_loaded, 100)\n",
|
|
" }\n",
|
|
" }\n",
|
|
"\n",
|
|
"\n",
|
|
" function run_callbacks() {\n",
|
|
" try {\n",
|
|
" root._bokeh_onload_callbacks.forEach(function(callback) {\n",
|
|
" if (callback != null)\n",
|
|
" callback();\n",
|
|
" });\n",
|
|
" } finally {\n",
|
|
" delete root._bokeh_onload_callbacks\n",
|
|
" }\n",
|
|
" console.debug(\"Bokeh: all callbacks have finished\");\n",
|
|
" }\n",
|
|
"\n",
|
|
" function load_libs(css_urls, js_urls, callback) {\n",
|
|
" if (css_urls == null) css_urls = [];\n",
|
|
" if (js_urls == null) js_urls = [];\n",
|
|
"\n",
|
|
" root._bokeh_onload_callbacks.push(callback);\n",
|
|
" if (root._bokeh_is_loading > 0) {\n",
|
|
" console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n",
|
|
" return null;\n",
|
|
" }\n",
|
|
" if (js_urls == null || js_urls.length === 0) {\n",
|
|
" run_callbacks();\n",
|
|
" return null;\n",
|
|
" }\n",
|
|
" console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n",
|
|
" root._bokeh_is_loading = css_urls.length + js_urls.length;\n",
|
|
"\n",
|
|
" function on_load() {\n",
|
|
" root._bokeh_is_loading--;\n",
|
|
" if (root._bokeh_is_loading === 0) {\n",
|
|
" console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n",
|
|
" run_callbacks()\n",
|
|
" }\n",
|
|
" }\n",
|
|
"\n",
|
|
" function on_error(url) {\n",
|
|
" console.error(\"failed to load \" + url);\n",
|
|
" }\n",
|
|
"\n",
|
|
" for (let i = 0; i < css_urls.length; i++) {\n",
|
|
" const url = css_urls[i];\n",
|
|
" const element = document.createElement(\"link\");\n",
|
|
" element.onload = on_load;\n",
|
|
" element.onerror = on_error.bind(null, url);\n",
|
|
" element.rel = \"stylesheet\";\n",
|
|
" element.type = \"text/css\";\n",
|
|
" element.href = url;\n",
|
|
" console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n",
|
|
" document.body.appendChild(element);\n",
|
|
" }\n",
|
|
"\n",
|
|
" const hashes = {\"https://cdn.bokeh.org/bokeh/release/bokeh-2.3.3.min.js\": \"dM3QQsP+wXdHg42wTqW85BjZQdLNNIXqlPw/BgKoExPmTG7ZLML4EGqLMfqHT6ON\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-2.3.3.min.js\": \"8x57I4YuIfu8XyZfFo0XVr2WAT8EK4rh/uDe3wF7YuW2FNUSNEpJbsPaB1nJ2fz2\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-2.3.3.min.js\": \"3QTqdz9LyAm2i0sG5XTePsHec3UHWwVsrOL68SYRoAXsafvfAyqtQ+h440+qIBhS\"};\n",
|
|
"\n",
|
|
" for (let i = 0; i < js_urls.length; i++) {\n",
|
|
" const url = js_urls[i];\n",
|
|
" const element = document.createElement('script');\n",
|
|
" element.onload = on_load;\n",
|
|
" element.onerror = on_error.bind(null, url);\n",
|
|
" element.async = false;\n",
|
|
" element.src = url;\n",
|
|
" if (url in hashes) {\n",
|
|
" element.crossOrigin = \"anonymous\";\n",
|
|
" element.integrity = \"sha384-\" + hashes[url];\n",
|
|
" }\n",
|
|
" console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n",
|
|
" document.head.appendChild(element);\n",
|
|
" }\n",
|
|
" };\n",
|
|
"\n",
|
|
" function inject_raw_css(css) {\n",
|
|
" const element = document.createElement(\"style\");\n",
|
|
" element.appendChild(document.createTextNode(css));\n",
|
|
" document.body.appendChild(element);\n",
|
|
" }\n",
|
|
"\n",
|
|
" \n",
|
|
" var js_urls = [\"https://cdn.bokeh.org/bokeh/release/bokeh-2.3.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-2.3.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-2.3.3.min.js\"];\n",
|
|
" var css_urls = [];\n",
|
|
" \n",
|
|
"\n",
|
|
" var inline_js = [\n",
|
|
" function(Bokeh) {\n",
|
|
" Bokeh.set_log_level(\"info\");\n",
|
|
" },\n",
|
|
" function(Bokeh) {\n",
|
|
" \n",
|
|
" \n",
|
|
" }\n",
|
|
" ];\n",
|
|
"\n",
|
|
" function run_inline_js() {\n",
|
|
" \n",
|
|
" if (root.Bokeh !== undefined || force === true) {\n",
|
|
" \n",
|
|
" for (var i = 0; i < inline_js.length; i++) {\n",
|
|
" inline_js[i].call(root, root.Bokeh);\n",
|
|
" }\n",
|
|
" if (force === true) {\n",
|
|
" display_loaded();\n",
|
|
" }} else if (Date.now() < root._bokeh_timeout) {\n",
|
|
" setTimeout(run_inline_js, 100);\n",
|
|
" } else if (!root._bokeh_failed_load) {\n",
|
|
" console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n",
|
|
" root._bokeh_failed_load = true;\n",
|
|
" } else if (force !== true) {\n",
|
|
" var cell = $(document.getElementById(\"1309\")).parents('.cell').data().cell;\n",
|
|
" cell.output_area.append_execute_result(NB_LOAD_WARNING)\n",
|
|
" }\n",
|
|
"\n",
|
|
" }\n",
|
|
"\n",
|
|
" if (root._bokeh_is_loading === 0) {\n",
|
|
" console.debug(\"Bokeh: BokehJS loaded, going straight to plotting\");\n",
|
|
" run_inline_js();\n",
|
|
" } else {\n",
|
|
" load_libs(css_urls, js_urls, function() {\n",
|
|
" console.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n",
|
|
" run_inline_js();\n",
|
|
" });\n",
|
|
" }\n",
|
|
"}(window));"
|
|
],
|
|
"application/vnd.bokehjs_load.v0+json": "\n(function(root) {\n function now() {\n return new Date();\n }\n\n var force = true;\n\n if (typeof root._bokeh_onload_callbacks === \"undefined\" || force === true) {\n root._bokeh_onload_callbacks = [];\n root._bokeh_is_loading = undefined;\n }\n\n \n\n \n if (typeof (root._bokeh_timeout) === \"undefined\" || force === true) {\n root._bokeh_timeout = Date.now() + 5000;\n root._bokeh_failed_load = false;\n }\n\n var NB_LOAD_WARNING = {'data': {'text/html':\n \"<div style='background-color: #fdd'>\\n\"+\n \"<p>\\n\"+\n \"BokehJS does not appear to have successfully loaded. If loading BokehJS from CDN, this \\n\"+\n \"may be due to a slow or bad network connection. Possible fixes:\\n\"+\n \"</p>\\n\"+\n \"<ul>\\n\"+\n \"<li>re-rerun `output_notebook()` to attempt to load from CDN again, or</li>\\n\"+\n \"<li>use INLINE resources instead, as so:</li>\\n\"+\n \"</ul>\\n\"+\n \"<code>\\n\"+\n \"from bokeh.resources import INLINE\\n\"+\n \"output_notebook(resources=INLINE)\\n\"+\n \"</code>\\n\"+\n \"</div>\"}};\n\n function display_loaded() {\n var el = document.getElementById(\"1309\");\n if (el != null) {\n el.textContent = \"BokehJS is loading...\";\n }\n if (root.Bokeh !== undefined) {\n if (el != null) {\n el.textContent = \"BokehJS \" + root.Bokeh.version + \" successfully loaded.\";\n }\n } else if (Date.now() < root._bokeh_timeout) {\n setTimeout(display_loaded, 100)\n }\n }\n\n\n function run_callbacks() {\n try {\n root._bokeh_onload_callbacks.forEach(function(callback) {\n if (callback != null)\n callback();\n });\n } finally {\n delete root._bokeh_onload_callbacks\n }\n console.debug(\"Bokeh: all callbacks have finished\");\n }\n\n function load_libs(css_urls, js_urls, callback) {\n if (css_urls == null) css_urls = [];\n if (js_urls == null) js_urls = [];\n\n root._bokeh_onload_callbacks.push(callback);\n if (root._bokeh_is_loading > 0) {\n console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n return null;\n }\n if (js_urls == null || js_urls.length === 0) {\n run_callbacks();\n return null;\n }\n console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n root._bokeh_is_loading = css_urls.length + js_urls.length;\n\n function on_load() {\n root._bokeh_is_loading--;\n if (root._bokeh_is_loading === 0) {\n console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n run_callbacks()\n }\n }\n\n function on_error(url) {\n console.error(\"failed to load \" + url);\n }\n\n for (let i = 0; i < css_urls.length; i++) {\n const url = css_urls[i];\n const element = document.createElement(\"link\");\n element.onload = on_load;\n element.onerror = on_error.bind(null, url);\n element.rel = \"stylesheet\";\n element.type = \"text/css\";\n element.href = url;\n console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n document.body.appendChild(element);\n }\n\n const hashes = {\"https://cdn.bokeh.org/bokeh/release/bokeh-2.3.3.min.js\": \"dM3QQsP+wXdHg42wTqW85BjZQdLNNIXqlPw/BgKoExPmTG7ZLML4EGqLMfqHT6ON\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-2.3.3.min.js\": \"8x57I4YuIfu8XyZfFo0XVr2WAT8EK4rh/uDe3wF7YuW2FNUSNEpJbsPaB1nJ2fz2\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-2.3.3.min.js\": \"3QTqdz9LyAm2i0sG5XTePsHec3UHWwVsrOL68SYRoAXsafvfAyqtQ+h440+qIBhS\"};\n\n for (let i = 0; i < js_urls.length; i++) {\n const url = js_urls[i];\n const element = document.createElement('script');\n element.onload = on_load;\n element.onerror = on_error.bind(null, url);\n element.async = false;\n element.src = url;\n if (url in hashes) {\n element.crossOrigin = \"anonymous\";\n element.integrity = \"sha384-\" + hashes[url];\n }\n console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n document.head.appendChild(element);\n }\n };\n\n function inject_raw_css(css) {\n const element = document.createElement(\"style\");\n element.appendChild(document.createTextNode(css));\n document.body.appendChild(element);\n }\n\n \n var js_urls = [\"https://cdn.bokeh.org/bokeh/release/bokeh-2.3.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-2.3.3.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-2.3.3.min.js\"];\n var css_urls = [];\n \n\n var inline_js = [\n function(Bokeh) {\n Bokeh.set_log_level(\"info\");\n },\n function(Bokeh) {\n \n \n }\n ];\n\n function run_inline_js() {\n \n if (root.Bokeh !== undefined || force === true) {\n \n for (var i = 0; i < inline_js.length; i++) {\n inline_js[i].call(root, root.Bokeh);\n }\n if (force === true) {\n display_loaded();\n }} else if (Date.now() < root._bokeh_timeout) {\n setTimeout(run_inline_js, 100);\n } else if (!root._bokeh_failed_load) {\n console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n root._bokeh_failed_load = true;\n } else if (force !== true) {\n var cell = $(document.getElementById(\"1309\")).parents('.cell').data().cell;\n cell.output_area.append_execute_result(NB_LOAD_WARNING)\n }\n\n }\n\n if (root._bokeh_is_loading === 0) {\n console.debug(\"Bokeh: BokehJS loaded, going straight to plotting\");\n run_inline_js();\n } else {\n load_libs(css_urls, js_urls, function() {\n console.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n run_inline_js();\n });\n }\n}(window));"
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" var render_items = [{\"docid\":\"e2c9a3ef-a33b-48a5-b188-22506477a95c\",\"root_ids\":[\"1665\"],\"roots\":{\"1665\":\"26abee02-9ad0-4c58-8135-fd4621c8ee0a\"}}];\n",
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" root.Bokeh.embed.embed_items_notebook(docs_json, render_items);\n",
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"\n",
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" }\n",
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" if (root.Bokeh !== undefined) {\n",
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" embed_document(root);\n",
|
|
" } else {\n",
|
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" var attempts = 0;\n",
|
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" var timer = setInterval(function(root) {\n",
|
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" if (root.Bokeh !== undefined) {\n",
|
|
" clearInterval(timer);\n",
|
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" embed_document(root);\n",
|
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" } else {\n",
|
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" attempts++;\n",
|
|
" if (attempts > 100) {\n",
|
|
" clearInterval(timer);\n",
|
|
" console.log(\"Bokeh: ERROR: Unable to run BokehJS code because BokehJS library is missing\");\n",
|
|
" }\n",
|
|
" }\n",
|
|
" }, 10, root)\n",
|
|
" }\n",
|
|
"})(window);"
|
|
],
|
|
"application/vnd.bokehjs_exec.v0+json": ""
|
|
},
|
|
"metadata": {
|
|
"application/vnd.bokehjs_exec.v0+json": {
|
|
"id": "1665"
|
|
}
|
|
},
|
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"output_type": "display_data"
|
|
}
|
|
],
|
|
"source": [
|
|
"import numpy as np\n",
|
|
"import seaborn as sns\n",
|
|
"\n",
|
|
"from bokeh.plotting import figure, show\n",
|
|
"from bokeh.io import output_notebook\n",
|
|
"from bokeh.layouts import gridplot\n",
|
|
"from bokeh.transform import factor_cmap, factor_mark\n",
|
|
"\n",
|
|
"output_notebook()\n",
|
|
"\n",
|
|
"# Load the seaborn penguin dataset (pandas.DataFrame)\n",
|
|
"penguins = sns.load_dataset('penguins')\n",
|
|
"# Get the unique list of species for the marker and color mapping\n",
|
|
"species = penguins['species'].unique()\n",
|
|
"# Specify the marker list which will be mapped to the 3 species\n",
|
|
"markers = ['circle', 'square', 'triangle']\n",
|
|
"# Create a list of rows so we can build the grid of plots\n",
|
|
"rows = []\n",
|
|
"\n",
|
|
"for y in ('body_mass_g', 'flipper_length_mm'):\n",
|
|
" row = []\n",
|
|
" rows.append(row)\n",
|
|
"\n",
|
|
" for x in ('body_mass_g', 'flipper_length_mm', 'bill_length_mm'):\n",
|
|
" # Create a figure with a fixed size and pass along the labels\n",
|
|
" p = figure(width=250, height=250,\n",
|
|
" x_axis_label=x, y_axis_label=y)\n",
|
|
" row.append(p)\n",
|
|
" \n",
|
|
" if x == y:\n",
|
|
" # Calculate the histogram using numpy and make sure to drop\n",
|
|
" # the NaN values\n",
|
|
" hist, edges = np.histogram(penguins[x].dropna(), bins=250)\n",
|
|
" # Draw the histograms as quadrilaterals (rectangles)\n",
|
|
" p.quad(top=hist, bottom=0, left=edges[:-1], right=edges[1:])\n",
|
|
" else:\n",
|
|
" # Create a scatter-plot\n",
|
|
" p.scatter(\n",
|
|
" # Specify the columns of the dataframe to show on the\n",
|
|
" # x and y axis\n",
|
|
" x, y,\n",
|
|
" # Specify the datasource, the pandas.DataFrame is\n",
|
|
" # natively supported by bokeh\n",
|
|
" source=penguins,\n",
|
|
" # Specify the column that contains the legend data\n",
|
|
" legend_field='species',\n",
|
|
" # Map the species onto our list of markers\n",
|
|
" marker=factor_mark('species', markers, species),\n",
|
|
" # Map the species to the Greys4 color palette\n",
|
|
" color=factor_cmap('species', 'Greys4', factors=species),\n",
|
|
" # Add transparency to the markers to make them easier\n",
|
|
" # to see\n",
|
|
" fill_alpha=0.2,\n",
|
|
" )\n",
|
|
" \n",
|
|
"# Show a grid of plots. Expects a 2D array\n",
|
|
"show(gridplot(rows))\n"
|
|
]
|
|
}
|
|
],
|
|
"metadata": {
|
|
"kernelspec": {
|
|
"display_name": "Python 3 (ipykernel)",
|
|
"language": "python",
|
|
"name": "python3"
|
|
},
|
|
"language_info": {
|
|
"codemirror_mode": {
|
|
"name": "ipython",
|
|
"version": 3
|
|
},
|
|
"file_extension": ".py",
|
|
"mimetype": "text/x-python",
|
|
"name": "python",
|
|
"nbconvert_exporter": "python",
|
|
"pygments_lexer": "ipython3",
|
|
"version": "3.9.7"
|
|
}
|
|
},
|
|
"nbformat": 4,
|
|
"nbformat_minor": 5
|
|
}
|